psc.riken.jp

prime.psc.riken.jp

PRIMe: Platform for RIKEN Metabolomics

The Platform for RIKEN Metabolomics, is a Web-based service for metabolomics and transcriptomics as systems for understanding life. This project measures standard metabolites by means of multi-dimensional NMR spectroscopy, GC/MS, LC/MS, and CE/MS. We also provide unique tools for metabolomics, transcriptomics, and integrated analysis of a range of other "-omics" data. April 3 ,2017 PRIMe Renewal open. 9658; Change log. February 11, 2017. January 16, 2017. June 2, 2015. April 28, 2014. January 24, 2014.

mrg.psc.riken.jp

Toppage of Morphogenesis Research Group

Link to PRIDE toppage. Link to TAB toppage. Link to RIKEN official HP. Laboratory for Gene Regulation. Laboratory for Structural Construction. Search EST clone by BLAST. Please send any comments etc to webmaster. Last modified: May 20, 2003.

hormones.psc.riken.jp

RIKEN Plant Hormone Research Network

RIKEN Plant Hormone Research Network. In RIKEN, there are a lot of researchers studying plant hormones including biosynthesis, signaling, and other aspects. RIKEN Plant Hormone Research Network is a research network, which is composed of laboratories related to plant hormones in RIKEN Center for Sustainable Resource Science. This web site provides information of research activities in RIKEN, basic knowledge for hormone research, and our technical platform of hormone analysis. Publication list was updated.

cassava.psc.riken.jp

Cassava Online Archive - Information resource of cassava for genetic improvement -

Cassava Online Archive - Information resource of cassava for genetic improvement - ver.1. Cassava ( Manihot esculenta. Euphorbiaceae), poplar ( Populus trichocarpa. Salicaceae), grape ( Vitis vinifera. Vitaceae), and Arabidopsis thaliana. Brassicaceae) genome sequences because the dataset of the cassava genome sequence is still not available. In order to improve the annotations, domain organization as predicted by InterProScan and Gene Ontology (GO) terms are included in this database. Express sequence t...

gb2.psc.riken.jp

Arabidopsis chromosome: 14.47 kbp from Chr1:3,190,826..3,205,293

Recenter on this region. Dump selection as FASTA. Submit selection to NCBI BLAST. Help with this browser. Show my user ID. Arabidopsis chromosome: 14.47 kbp from Chr1:3,190,826.3,205,293. Download Decorated FASTA File. Show 14.47 kbp. Protein Coding Gene Models. Show Active Tracks Only. Protein Coding Gene Models. Help with uploading custom tracks]. There are no tracks yet. Add custom tracks : [From text]. Highlight feature(s) (feature1 feature2.). RIKEN Center for Sustainable Resource Science.

rarge-v2.psc.riken.jp

Home - RIKEN Arabidopsis Genome Encyclopedia

RIKEN Arabidopsis Genome Encyclopedia. Arabidopsis full-length cDNA information is available and searchable by gene description, gene name, and cDNA clone name. Information regarding Arabidopsis transposon mutant lines and overexpressed lines is available and searchable by gene description, gene name, and line name. An advanced search function with an ontology tree of phenotypes for transposon mutant lines and overexpressed lines has been provided. RIKEN Arabidopsis Transcription Factor (RARTF) database.

univio.psc.riken.jp

Home - Uniformed Viewer for Integrative Omics

Uniformed Viewer for Integrative Omics. Search measured data using an ID or a name. The data will be displayed as a heat map according to the expression level. Specify the data records for which the phytohormone name or probe ID are to be displayed. Find data records which are correlated with a particular phytohormone/transcript level. Search for gene probes and phytohormones by using gene description, gene ontology, and phytohormone name. Gene description, gene ontology, and phytohormone name.

trimedb.psc.riken.jp

TriMEDB:Triticeae Mapped EST DataBase ver.2.0

Ase ver.2.0. Mapped EST database) provides information on mapped cDNA markers that are related between barley and wheat, along with various annotations. The current version of TriMEDB provides map-location data for barley and wheat ESTs retrieved from three published barley linkage maps; the barley SNP database of SCRI (. Http:/ bioinf.scri.ac.uk/barley snpdb/. Barley transcript map of IPK (. Http:/ pgrc.ipk-gatersleben.de/transcript map/. And HarvEST barley ver. 1.63 and 1.68 (. Relation to TriFLDB: Tri...

trifldb.psc.riken.jp

TriFLDB:Triticeae Full-Length CDS Database

Triticeae full-length CDS database. That were newly sequenced in RIKEN. And Kihara Institute for Biological Research, Yokohama City University supported by National Bio Resource Project in Japan. Protein domain organization and GeneOntology assignment. Protein domain searches for TriFLCDS entries were carried out by using the iprscan program. The GO terms assigned with each entry have also interrelated based on iprscan search. Plant Physiol. 2009 May 15. To predict the gene structure of each TriFLCDS, SI...

striga.psc.riken.jp

Striga EST database

An obligate root hemiparasites belonging to the Orobanchaeceae. Is the biggest weed threat on agriculture of sub-saharan Africa. S. hermonthica. Infests major crops, such as sorghum, maize, millet and upland rice, and causes considerable yield losses. However, the control methods for Striga. Infestation has not yet been established and molecular basis for its parasitism is poorly understood. A catalogue of Expressed Sequence Tags (EST). We hope our database will contribute to further progress on Striga.