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Yasunori Osana
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Osana Yasunori
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ReCSiP: the Frontpage | recsip.org Reviews
https://recsip.org
We've just moved (Sep.01, 2005). Our new website recsip.org. Last modified: Mon Sep 5 11:05:20 JST 2005.
recsip.org
ReCSiP: the Frontpage
http://www.recsip.org/introduction.html
ReCSiP is an FPGA-Based, ultra high-throughput biochemical pathway simulator. Research for both of ODE-based and stochastic simulator is going on. Currently, the explicit ODE-based simulator is our main task, but project for stochastic version is also running. On the other hand, some other groups are developing stochastic biochemical simulators on FPGAs. However, the systems (including ours) cannot simulate large biochemical networks because they have no scalability to the target systems. We're n...
ReCSiP: Publications
http://www.recsip.org/publication.html
ReCSiP (ODE) Papers and Presentations. A Framework for ODE-Based Multimodel Biochemical Simulations on an FPGA. YOsana, T.Fukushima, M.Yoshimi, Y.Iwaoka, A.Funahashi, N.Hiroi, Y.Shibata, N.Iwanaga, H.Kitano and H.Amano. In Proc. of the FPL'05 (Aug.2005, Tampere, Finland), pp.574-577. Efficient Scheduling of Rate Law Functions for ODE-Based Multimodel Biochemical Simulation on an FPGA. In Proc. of the FPL'05 (Aug.2005, Tampere, Finland), pp.666-669. YOsana, T.Fukushima, M.Yoshimi and H.Amano. In Proc....
ReCSiP: Links
http://www.recsip.org/links.html
SBML: Systems Biology Markup Language. SBW: Systems Biology Workbench. Amano Lab., Keio Univ. Last modified: Mon Mar 28 17:14:02 JST 2005.
ReCSiP: Resources and Status
http://www.recsip.org/resources.html
Unpack (32bit IEEE format - 35bit ReCSiP format). Repack (35bit ReCSiP format - 32bit IEEE format). These modules will be soon available under LGPL license. The Solver Core Library. Solver cores are the heart of ReCSiP, which are the HDL implementation of rate-law functions. Solver cores can be connected with desired integration modules to run simulations. Currently, 19 rate-law functions in the 33 functions defined in SBML Level1. SCML: Solver Configuration Markup Language. ReCSiP Board is our first 64b...
ReCSiP: the Frontpage
http://www.recsip.org/index.html
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ReCSiP: the Frontpage
We've just moved (Sep.01, 2005). Our new website recsip.org. Last modified: Mon Sep 5 11:05:20 JST 2005.
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