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CGEB - Integrated Microbiome Resource (IMR)

Information and access to services provided by the Dalhousie University Integrated Microbiome Resource

http://www.cgeb-imr.ca/

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CGEB - Integrated Microbiome Resource (IMR) | cgeb-imr.ca Reviews
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Information and access to services provided by the Dalhousie University Integrated Microbiome Resource
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1 microbiome
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3 Halifax
4 NGS
5 16S
6 18S
7 metagenomics
8 metatranscriptomics
9 MiSeq
10 Illumina
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explore,about us,achievements,project/sample submissions,pricing,protocols,sample collection,dna/rna extraction,16s amplicons,18s amplicons,meta genomes,meta transcriptomes,ngs sequencing,bioinformatics,through sample preparation,and sequencing,cgeb
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CGEB - Integrated Microbiome Resource (IMR) | cgeb-imr.ca Reviews

https://cgeb-imr.ca

Information and access to services provided by the Dalhousie University Integrated Microbiome Resource

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1

CGEB - Integrated Microbiome Resource (IMR)

http://cgeb-imr.ca/submissions.html

Integrated Microbiome Resource (IMR). Library Preparation …. Contact the IMR Manager. Directly to initiate your project's consultation, then download our Excel form:. Amplicon Sample Submission Form. This form is to be filled out with all of your details for tracking purposes and has sample preparation and shipping guidelines ( please pay careful attention for international clients. You will be given a unique project/sample identifier in the form of " IMR-YYYYMM-00. Sample queuing and real-time status.

2

CGEB - Integrated Microbiome Resource (IMR)

http://cgeb-imr.ca/achieve.html

Integrated Microbiome Resource (IMR). Library Preparation …. As of the end of September 2016, we've completed Run 51. Containing over 14,000 samples. Covering 168 different scientific projects. Of 55 Principle Investigators. IMR Members, other academics and commercial clients). We have sequenced over 1.5 billion reads. Containing nearly 715 billion bases. And these numbers are growing continuously. Summary of Sample Types/Origins. To applied research in wastewater treatment and bioreactors.

3

CGEB - Integrated Microbiome Resource (IMR)

http://cgeb-imr.ca/pricing.html

Integrated Microbiome Resource (IMR). Library Preparation …. Current IMR Pricing - February 2016. Currently Available Amplicon Targets. Please note that all values listed below are in Canadian dollars (CDN$). 16S/18S/ITS Amplicons (per sample) - Academic. Library Preparation Sequencing ( 50,000 reads/sample). Standard Bioinformatics Analysis Pipeline. 16S/18S/ITS Amplicons (per sample) - Commercial. Library Preparation Sequencing ( 50,000 reads/sample). Standard Bioinformatics Analysis Pipeline. 1 One co...

4

CGEB - Integrated Microbiome Resource (IMR)

http://cgeb-imr.ca/protocols.html

Integrated Microbiome Resource (IMR). Library Preparation …. Comeau AM, Douglas GM, Langille M. 201X A custom and streamlined workflow for microbiome research. mSystems. Submitted. [ overview of the entire IMR wet-lab and bioinformatics pipeline. Comeau AM, Li WK, Tremblay JE, Carmack EC, Lovejoy C. 2011 Arctic Ocean microbial community structure before and after the 2007 record sea ice minimum. PLoS ONE. 6:e27492. Link to Article. William W, et al. 1:e00009-15. Link to Article. At www.earthmicrobiom...

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CGEB - Integrated Microbiome Resource (IMR)

http://cgeb-imr.ca/index.html

Integrated Microbiome Resource (IMR). Centre for Comparative Genomics and Evolutionary Bioinformatics. CGEB) • Dalhousie University. Library Preparation …. Welcome to the CGEB IMR. A sequencing and bioinformatic analysis resource for the microbiome community. We help researchers,. Clinicians and industry tackle the challenges of microbiome science, guiding them from study design consultation. To final data analysis. Learn about the people behind the IMR, our funding/partners and our mandate.

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LINKS TO THIS WEBSITE

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CGEB - Links

http://cgeb.dal.ca/links.html

The new CGEB - Integrated Microbial Resource. Was established in 2014 through support from the Strategic Research Initiatives Fund (SRIF) from the Office of the Vice-President Research, Dalhousie University. See link (http:/ cgeb-imr.ca/) at: website. See link to Dal Power. Video series highlighting Dalhousie researchers (Dr. Andrew Roger's lab was featured in 2013): website. Last updated: Dec. 2014.

morganlangille.com morganlangille.com

Langille Lab @ Dalhousie University

http://morganlangille.com/teaching.html

Canadian Bioinformatics Workshop: Analysis of Metagenomic Data. 2015 @ Halifax, 2016 @ Vancouver). Strategies and Techniques for Analyzing Microbial Population Structure (STAMPS). MBL, Woods Hole, MA. PHAC 1470: Pharmacology for Pharmacy. PHAC4001/5409: Introduction to Pharmacology II. BIOL5705: Graduate Module Classes (Gene Sequence Analysis).

morganlangille.com morganlangille.com

Langille Lab @ Dalhousie University

http://morganlangille.com/pubs.html

Laird MR, Langille MGI. Brinkman FSL (2015) GenomeD3Plot: A library for rich, interactive visualizations of genomic data in web applications , Bioinformatics. Jun 20. pii: btv376. Dhillon B, Laird M, Shay J, Winsor G, Lo R, Nizam F, Sheldon P, Waglechner N, McArthur A, Langille MGI. Brinkman FSL. (2015) IslandViewer 3: more flexible, interactive genomic island discovery, visualization and analysis , Nucleic Acids Research. Hester CM, Jala VR, Langille MGI. Xu Z, Malmer D, Langille MGI. Beiko RG (2013) "G...

morganlangille.com morganlangille.com

Langille Lab @ Dalhousie University

http://morganlangille.com/index.html

Welcome to The Langille Lab in the Department of Pharmacology at Dalhousie University, Halifax, Nova Scotia, Canada. Our lab is interested in improving human health by looking at personal genomic and microbiome differences and how those relate to various diseases and drug metabolism. We are always looking for new research collaborations and opportunities so please don't hesitate to contact us.

morganlangille.com morganlangille.com

Langille Lab @ Dalhousie University

http://morganlangille.com/positions.html

Research Opportunities and Positions. Training in the Langille laboratory provides opportunities to gain experience and expertise in the areas of bioinformatics, microbiomics, and next-generation sequencing. Undergraduate students (summer), graduate students (MSc or PhD), and post-docs interested in joining the lab should send a summary of their interests and background via Contact Us.

morganlangille.com morganlangille.com

Langille Lab @ Dalhousie University

http://morganlangille.com/members.html

Morgan G. I. Langille, PhD. Canada Research Chair in Human Microbiomics. Email: morgan.g.i.langille@dal.ca. André M. Comeau, PhD. Research Associate and Lab Manager. Email: andre.comeau@dal.ca. Gavin Douglas, MSc. Email: gavin.douglas@dal.ca. Dept of Microbiology and Immunology. NSERC USRA Summer Student. Email: Mary.Hayes@dal.ca. Email: alex.whynot@dal.ca. Akhilesh Dhanani, PhD. Post-doc (in collaboration with primary supervisor R. Beiko). Faculty of Computer Science.

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CGEB - Integrated Microbiome Resource (IMR)

Integrated Microbiome Resource (IMR). Centre for Comparative Genomics and Evolutionary Biology. CGEB) • Dalhousie University. Library Preparation …. Welcome to the CGEB IMR. A sequencing and bioinformatic analysis resource for the microbiome community. We help researchers,. Clinicians and industry tackle the challenges of microbiome science, guiding them from study design consultation. To final data analysis. Learn about the people behind the IMR, our funding/partners and our mandate.

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CGEB - Centre for Comparative Genomics and Evolutionary Bioinformatics

A Dalhousie University Centre elucidating the pattern and process of molecular evolution through comparative genomics and bioinformatics. The pathways by which microbial organisms have diversified over the last 3.5 billion years of Earth's history and through which they continue to shape the global environment. Only through the integration of experimental genomic approaches and sophisticated bioinformatic modeling will we be able to achieve this goal. Last updated: July, 2016 site design by Derek Tan.

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