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opencomp | Just another WordPress.com siteJust another WordPress.com site
http://antagomir.wordpress.com/
Just another WordPress.com site
http://antagomir.wordpress.com/
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opencomp | Just another WordPress.com site | antagomir.wordpress.com Reviews
https://antagomir.wordpress.com
Just another WordPress.com site
October | 2013 | opencomp
https://antagomir.wordpress.com/2013/10
Just another WordPress.com site. Monthly Archives: October 2013. RPA: fully scalable preprocessing method for short oligonucleotide microarray atlases. October 20, 2013. How to preprocess 20,000 CEL files (or more) on an ordinary desktop computer in a few hours? Our new Online-RPA algorithm – developed in collaboration with the EBI functional genomics group and recently published in Nucleic Acids Research (2013) – … Continue reading →. Open PhD student position in Digital Humanities, Helsinki/Finland.
December | 2010 | opencomp
https://antagomir.wordpress.com/2010/12
Just another WordPress.com site. Monthly Archives: December 2010. Deciphering the structure of life and society through open science. December 24, 2010. Understanding functional organization of genetic information is a major challenge in modern biology. Following the initial publication of the human genome sequence in 2001, advances in high-throughput measurement technologies and efficient sharing of research material through community databases have opened … Continue reading →. Blog at WordPress.com.
Shakespeare! Cervantes! 400! A statistical analysis of the early modern printing of the Bard and Don Quixote | opencomp
https://antagomir.wordpress.com/2016/04/23/shakespeare-cervantes-400-a-statistical-analysis-of-the-early-modern-printing-of-the-bard-and-don-quixote
Just another WordPress.com site. RPA: fully scalable preprocessing method for short oligonucleotide microarray atlases. Open PhD student position in Digital Humanities, Helsinki/Finland →. A statistical analysis of the early modern printing of the Bard and Don Quixote. April 23, 2016. We are a team of an early modern intellectual historian ( Mikko Tolonen. And a computational scientist and bioinformatician ( Leo Lahti. We decided to build on our peculiar interest in library catalogues. And manual data pr...
Machine learning open source software – ICML/MLOSS workshop June 25, 2010 | opencomp
https://antagomir.wordpress.com/2010/06/27/machine-learning-open-source-software-icml10-workshop-25-6-2010
Just another WordPress.com site. International Conference on Machine Learning, Haifa, Israel, June 21-25, 2010. Deciphering the structure of life and society through open science →. Machine learning open source software – ICML/MLOSS workshop June 25, 2010. June 27, 2010. Computational solutions developed in one application domain are often easily generalized to new problem settings. However, the poor availability of algorithmic implementations slows down the flow from theory to practice. An incre...Unres...
opencomp | Just another WordPress.com site | Page 2
https://antagomir.wordpress.com/page/2
Just another WordPress.com site. Newer posts →. International Conference on Machine Learning, Haifa, Israel, June 21-25, 2010. June 25, 2010. The sessions and talks are over at ICML’10. For a comprehensive list. Major commercial players who play a key role in transforming theoretical ideas into practice were also present. It is worth noting, though, that ethical review standards for such studies are lagging behind. Efficient approaches are needed to query and characterize such information. I am curio...
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Code ←
http://antagomir.github.io/code
Scientific Open Source Software. Links to mature computational software projects, typically including multiple individual packages. Further bleeding edge development code see GitHub. All implementations come with an open source license (see the brief memo on open licensing of scientific material. Digital Humanities and Computational Social Science. R package ecosystem for open data and computational social science (R/GitHub). Introduced and NIPS MLOSS workshop. 2013 Tools for Eurostat open data. Modeling...
Media ←
http://antagomir.github.io/media
Presentation slides, posters and other material available via Github. Presentation in Academic MindTrek, Tampere 24.9.2015. University of Helsinki ‘Tiedeviestinnän verkkosivut’ 26.2.2014. Helsinki, Finland 21.9.2012. Open Tools for Open Data in Finland. SHARE Conference, Belgrade, Serbia 26.4.2012. Avoimen datan soRvi-kirjaston esittely. Esittelyvideot HRI:n sivuilla: ( video 1. ICML/MLSS Workshop. Haifa, Israel. June 2010. Co-authored blog on open data analysis. Design modified from Mark Reid.
Colophon ← Leo Lahti
http://antagomir.github.io/info/site
The design of this site is based on the original code by Mark Reid. The site design and contents is licensed under the Creative Commons Attribution-Noncommercial-Share Alike 3.0 Unported License. Design modified from Mark Reid.
Publications ← Leo Lahti
http://antagomir.github.io/work/pubs
The complete bibliography is available as BibTex. Copies of most papers and other outputs are available here. Or I can send PDF copies also by email, just ask! Intestinal microbiome landscaping: Insight in community assemblage and implications for microbial modulation strategies. Sudarshan Shetty, Floor Hugenholtz, Leo Lahti, Hauke Smidt, Willem M de Vos, Antoine Danchin. Fuw045, 2017 html. A Quantitative Study of History in the English Short-Title Catalogue (ESTC) 1470-1800. 25(2):87-116, 2015. html.
Info ←
http://antagomir.github.io/info
Human gut microbiota constitutes one of the most densely populated ecosystem on our planet. The known pan-genome carries 500-fold more unique genes than our own genome, it is highly dynamic in space and time, and a key contributor to immune system, digestion of food, and various health complications. Characterizing the overall structure, variability, and health associations of this virtual metabolic organ forms a major challenge for contemporary human biology. SocBIN); Electronic Frontier Finland. Foundi...
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Home ←
Academy of Finland Research Fellow 2016-2021. Finland. Docent/Adjunct Professor. Applied Mathematics. Belgium. Senior Postdoc. Open Science work group. Of the Open Knowledge Foundation Finland (OKF). Founding member. More info on my research activities and funding. Conference on Philosophy and History of Open Science (#PHOS16). Nov 30 - Dec 1, University of Helsinki, Finland. Computational science and high-throughput data analysis. Microbial ecology and functional genomics. Scientific open source software.
opencomp | Just another WordPress.com site
Just another WordPress.com site. Open PhD student position in Digital Humanities, Helsinki/Finland. July 26, 2016. We are looking for an independent and highly motivated PhD candidate to join our Digital Humanities research team in University of Helsinki, Finland in fall 2016. A statistical analysis of the early modern printing of the Bard and Don Quixote. April 23, 2016. We are a team of an early modern intellectual historian ( Mikko Tolonen. And a computational scientist and bioinformatician ( Leo Lahti.
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