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Agadir: An algorithm to predict the helical content of peptides.
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Agadir: An algorithm to predict the helical content of peptides.
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An algorithm to predict the helical content of peptides. How to use Agadir. In the latter case the intervals between any two values are:. Ionic strength 0.05 M. When setting the conditions for these parameters please be aware that the allowed ranges are:. Ionic strength between 0.001 and 1 M. Temperature between 273 and 400 K. PH between 1 and 14. When refering to Agadir, please reference the following papers. Muñoz, V. and Serrano, L. (1994a). Nature: Struct. Biol. 1, 399-409. J Mol Biol 245, 275-296.
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An algorithm to predict the helical content of peptides. Links to related sites. Program for calculating the folding pathways of proteins and the effect of a point mutation on the protein stability. Prediction of b-sheet aggregation. A Cell Network Simulation Program. Predicting amylogenic regions in protein sequences. Prediction of protein-protein interAction of moDular domAiNs. Molecular Phenotypes of Human Diseases. Intrinsic Protein Disorder Prediction.
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An algorithm to predict the helical content of peptides. Is a prediction algorithm based on the helix/coil transition theory. Predicts the helical behaviour of monomeric peptides. It only considers short range interactions. Conditions such as pH, temperature and ionic strength are used in the calculation. Modifications of the termini are also allowed. Keep in mind that Agadir. Is not a program to predict secondary structure of proteins. It is important to consider that the presence of aromatic residues c...
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Query within a category:. Query a specific database:. Protein sequences and identification. Sequence sites, features and motifs. No support from the ExPASy Team). Bull; protein structure homology models • [more]. Bull; SWISS-MODEL Repository is a database of protein structure homology models generated by the fully automated SWISS-MODEL modeling pipeline. [less]. Bull; structural information for a protein • [more]. Bull; non-natural amino-acid sidechains • [more]. Bull; SWISS-MODEL is a fully automated we...
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An algorithm to predict the helical content of peptides. Is a prediction algorithm based on the helix/coil transition theory. Predicts the helical behaviour of monomeric peptides. It only considers short range interactions. Conditions such as pH, temperature and ionic strength are used in the calculation. Modifications of the termini are also allowed. Keep in mind that Agadir. Is not a program to predict secondary structure of proteins. It is important to consider that the presence of aromatic residues c...
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